Hi-C analysis: from data generation to integration | SpringerLink
Hi-C analysis and genomic interactions in K562 cells. (A) Hi-C data... | Download Scientific Diagram
HIFI: estimating DNA-DNA interaction frequency from Hi-C data at restriction-fragment resolution | Genome Biology | Full Text
SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data | Nature Methods
Measuring the reproducibility and quality of Hi-C data | Genome Biology | Full Text
FreeHi-C: high fidelity Hi-C data simulation for benchmarking and data augmentation | bioRxiv
3D Genome browser: visualize Hi-C, ChIA-PET, HiCHiP, PLAC-Seq, Capture Hi-C data.
Homer Software and Data Download
2020 STAT115 Lect15.1 HiC Introduction - YouTube
Methods for comparative ChIA-PET and Hi-C data analysis - ScienceDirect
A supervised learning framework for chromatin loop detection in genome-wide contact maps | Nature Communications
Genome Browser hic Track Format
Hi-C Data Analysis Bootcamp
FreeHi-C simulates high-fidelity Hi-C data for benchmarking and data augmentation | Nature Methods
3D Genome browser: visualize Hi-C, ChIA-PET, HiCHiP, PLAC-Seq, Capture Hi-C data.
Hi-C (genomic analysis technique) - Wikipedia
Integration of Hi-C with short and long-read genome sequencing reveals the structure of germline rearranged genomes | Nature Communications
Robust single-cell Hi-C clustering by convolution- and random-walk–based imputation | PNAS
FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data | Genome Biology | Full Text
Comparison of normalization methods for Hi-C data | BioTechniques
MCB 182 Lecture 10.5 - Visualization of Hi-C data, bias in the Hi-C assay - YouTube
Visualization of Hi-C data. An Epigenome Browser snapshot of a 4 Mb... | Download Scientific Diagram
Genome Browser hic Track Format
Application of Hi-C and other omics data analysis in human cancer and cell differentiation research - ScienceDirect
3D Genome browser: visualize Hi-C, ChIA-PET, HiCHiP, PLAC-Seq, Capture Hi-C data.
Analyzing Hi-C data with the HiTC BioC package
